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  5. LOC_Os08g13690

LOC_Os08g13690


Description : 60S ribosomal protein L7, putative, expressed


Gene families : OG_42_0001114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g13690
Cluster HCCA clusters: cluster_0017

Target Alias Description ECC score Gene Family Method Actions
103994 No alias Ribosomal protein L30/L7 family protein 0.02 Orthogroups_2024-Update
At2g44120 No alias Ribosomal protein L30/L7 family protein... 0.02 Orthogroups_2024-Update
Bradi3g41850 No alias Ribosomal protein L30/L7 family protein 0.01 Orthogroups_2024-Update
Brara.B02397.1 No alias component *(uL30) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.D02679.1 No alias component *(uL30) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.I02011.1 No alias component *(uL30) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Glyma.08G222100 No alias Ribosomal protein L30/L7 family protein 0.03 Orthogroups_2024-Update
Glyma.16G036200 No alias Ribosomal protein L30/L7 family protein 0.03 Orthogroups_2024-Update
Mp3g13040.1 No alias component RPL7 of LSU proteome component 0.03 Orthogroups_2024-Update
Potri.006G073200 No alias Ribosomal protein L30/L7 family protein 0.03 Orthogroups_2024-Update
Potri.008G008000 No alias Ribosomal protein L30/L7 family protein 0.03 Orthogroups_2024-Update
Seita.6G231500.1 No alias component *(uL30) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Seita.7G228400.1 No alias component *(uL30) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc08g075090 No alias bHLH transcription factor144 0.03 Orthogroups_2024-Update
evm.model.contig_2085.3 No alias (at3g13580 : 237.0) Ribosomal protein L30/L7 family... 0.02 Orthogroups_2024-Update
evm.model.tig00020909.42 No alias (at2g44120 : 205.0) Ribosomal protein L30/L7 family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
CC GO:0019008 molybdopterin synthase complex IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0080009 mRNA methylation IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR016082 Ribosomal_L30_ferredoxin-like 87 137
IPR012988 Ribosomal_L30_N 11 81
No external refs found!