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  5. LOC_Os08g16120

LOC_Os08g16120


Description : disease resistance protein RPM1, putative, expressed


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g16120
Cluster HCCA clusters: cluster_0059

Target Alias Description ECC score Gene Family Method Actions
A4A49_01331 No alias putative late blight resistance protein-like r1a-6 0.02 Orthogroups_2024-Update
A4A49_07855 No alias putative late blight resistance protein-like r1b-12 0.03 Orthogroups_2024-Update
At1g50180 No alias Putative disease resistance protein At1g50180... 0.02 Orthogroups_2024-Update
At1g58410 No alias Probable disease resistance protein RXW24L... 0.02 Orthogroups_2024-Update
At5g35450 No alias Disease resistance RPP8-like protein 3... 0.02 Orthogroups_2024-Update
Brara.C04087.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.01G010700 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G111750.5 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU7Hr1G008210.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G008240.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g46300 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G134400 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Sobic.010G248900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g026110 No alias Disease resistance family protein (AHRD V3.3 *** B9GY55_POPTR) 0.02 Orthogroups_2024-Update
Solyc07g039410 No alias EDNR2GH3 protein (AHRD V3.3 *** E0Y3V4_9SOLN) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 236 475
No external refs found!