Description : Remodeling and spacing factor 1 (AHRD V3.3 *** A0A151SQU5_CAJCA)
Gene families : OG_42_0002059 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002059_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc08g068050 | |
Cluster | HCCA clusters: Cluster_266 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.04G073700 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
Glyma.04G176500 | No alias | DDT domain superfamily | 0.03 | Orthogroups_2024-Update | |
Seita.9G049600.1 | No alias | component *(DDR) of ISWI chromatin remodeling complex | 0.01 | Orthogroups_2024-Update | |
Sopen08g021940 | No alias | hypothetical protein | 0.07 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Predicted GO |
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
CC | GO:0000808 | origin recognition complex | IEP | Predicted GO |
CC | GO:0000922 | spindle pole | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
MF | GO:0003674 | molecular_function | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Predicted GO |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005664 | nuclear origin of replication recognition complex | IEP | Predicted GO |
CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
CC | GO:0005815 | microtubule organizing center | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006471 | protein ADP-ribosylation | IEP | Predicted GO |
BP | GO:0006621 | protein retention in ER lumen | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
BP | GO:0007020 | microtubule nucleation | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009147 | pyrimidine nucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009200 | deoxyribonucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009211 | pyrimidine deoxyribonucleoside triphosphate metabolic process | IEP | Predicted GO |
BP | GO:0009219 | pyrimidine deoxyribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009394 | 2'-deoxyribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0016052 | carbohydrate catabolic process | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
BP | GO:0019692 | deoxyribose phosphate metabolic process | IEP | Predicted GO |
BP | GO:0030488 | tRNA methylation | IEP | Predicted GO |
CC | GO:0030915 | Smc5-Smc6 complex | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
MF | GO:0031491 | nucleosome binding | IEP | Predicted GO |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
BP | GO:0032507 | maintenance of protein location in cell | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
CC | GO:0034708 | methyltransferase complex | IEP | Predicted GO |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Predicted GO |
MF | GO:0042277 | peptide binding | IEP | Predicted GO |
MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0045185 | maintenance of protein location | IEP | Predicted GO |
BP | GO:0046080 | dUTP metabolic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046923 | ER retention sequence binding | IEP | Predicted GO |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
BP | GO:0051235 | maintenance of location | IEP | Predicted GO |
BP | GO:0051651 | maintenance of location in cell | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
CC | GO:0106068 | SUMO ligase complex | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |