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  5. Solyc08g068320

Solyc08g068320


Description : Myb (AHRD V3.3 *** Q948S5_TOBAC)


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g068320
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
A4A49_17304 No alias myb-related protein 3r-1 0.04 Orthogroups_2024-Update
A4A49_18538 No alias myb-related protein 3r-1 0.02 Orthogroups_2024-Update
At5g11510 No alias Transcription factor MYB3R-4... 0.11 Orthogroups_2024-Update
Brara.C00465.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.19 Orthogroups_2024-Update
Brara.J02221.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.09 Orthogroups_2024-Update
Glyma.04G080600 No alias Homeodomain-like protein 0.23 Orthogroups_2024-Update
Glyma.06G082300 No alias Homeodomain-like protein 0.17 Orthogroups_2024-Update
HORVU4Hr1G008640.5 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Mp1g08640.1 No alias transcription factor (MYB) 0.03 Orthogroups_2024-Update
Pp1s200_41V6 No alias F24J1.31; myb family transcription factor (MYB105)... 0.03 Orthogroups_2024-Update
Seita.3G079800.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.01 Orthogroups_2024-Update
Sopen08g022170 No alias Myb-like DNA-binding domain 0.19 Orthogroups_2024-Update
evm.model.contig_4428.5 No alias (at5g02320 : 218.0) Encodes a putative c-MYB-like... 0.06 Orthogroups_2024-Update
evm.model.tig00020780.48 No alias (at4g32730 : 246.0) Encodes a putative c-myb-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 88 134
IPR001005 SANT/Myb 36 82
IPR001005 SANT/Myb 140 183
No external refs found!