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LOC_Os08g19870


Description : transposon protein, putative, Ac/Ds sub-class, expressed


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g19870
Cluster HCCA clusters: cluster_0118

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G162700 No alias hAT transposon superfamily 0.02 Orthogroups_2024-Update
PSME_00041191-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
Solyc06g048690 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 579 647
IPR007021 DUF659 208 331
No external refs found!