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  5. Solyc08g068370

Solyc08g068370


Description : ENTH/VHS/GAT family protein (AHRD V3.3 *** A0A061GKP2_THECC)


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc08g068370
Cluster HCCA clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
Brara.H01294.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Glyma.14G143000 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G031360.9 No alias ubiquitin adaptor protein *(TOL) 0.04 Orthogroups_2024-Update
Pp1s49_145V6 No alias vhs domain-containing protein gat domain-containing protein 0.02 Orthogroups_2024-Update
Sobic.007G008800.1 No alias ubiquitin adaptor protein *(TOL) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR002014 VHS_dom 3 121
IPR004152 GAT_dom 195 269
No external refs found!