Description : RING/U-box superfamily protein (AHRD V3.3 *-* AT1G53820.1)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc01g088450 | |
Cluster | HCCA clusters: Cluster_21 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_18667 | No alias | ring-h2 finger protein atl18 | 0.02 | Orthogroups_2024-Update | |
A4A49_37314 | No alias | e3 ubiquitin-protein ligase atl9 | 0.04 | Orthogroups_2024-Update | |
At1g49210 | No alias | E3 ubiquitin-protein ligase ATL76... | 0.04 | Orthogroups_2024-Update | |
Bradi5g19960 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.E00161.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
Brara.E01533.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Brara.G00998.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.H00317.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Glyma.11G242800 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.20G231900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G091610.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
MA_26001g0020 | No alias | (at1g72310 : 117.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
MA_31462g0010 | No alias | (at1g49220 : 101.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
MA_41514g0010 | No alias | (at5g01880 : 91.3) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
MA_5319g0010 | No alias | (at1g49230 : 120.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
MA_80729g0030 | No alias | (at3g16720 : 139.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
Potri.007G064400 | No alias | RING-H2 finger A3A | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00001128.32 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001871 | pattern binding | IEP | Predicted GO |
MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
MF | GO:0030570 | pectate lyase activity | IEP | Predicted GO |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 43 | 86 |
No external refs found! |