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  5. LOC_Os08g27010

LOC_Os08g27010


Description : APE1, putative, expressed


Gene families : OG_42_0008375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g27010
Cluster HCCA clusters: cluster_0119

Target Alias Description ECC score Gene Family Method Actions
117112 No alias acclimation of photosynthesis to environment 0.03 Orthogroups_2024-Update
Glyma.19G045600 No alias acclimation of photosynthesis to environment 0.05 Orthogroups_2024-Update
Potri.004G102100 No alias acclimation of photosynthesis to environment 0.02 Orthogroups_2024-Update
Pp1s273_61V6 No alias MBB18.21; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Sobic.007G108900.1 No alias photosynthetic acclimation APE acclimation factor 0.05 Orthogroups_2024-Update
Solyc03g034170 No alias acclimation of photosynthesis to environment (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen03g006950 No alias Protein of unknown function (DUF2854) 0.02 Orthogroups_2024-Update
evm.model.tig00000241.155 No alias (at5g38660 : 96.7) mutant has Altered acclimation... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR021275 DUF2854 104 254
No external refs found!