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  5. LOC_Os08g27290

LOC_Os08g27290


Description : hAT dimerisation domain-containing protein, putative, expressed


Gene families : OG_42_0000176 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g27290
Cluster HCCA clusters: cluster_0032

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31322 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.02 Orthogroups_2024-Update
Glyma.01G024100 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.02 Orthogroups_2024-Update
Glyma.04G110650 No alias General transcription factor 2-related zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.10G055700 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.02 Orthogroups_2024-Update
Glyma.18G099300 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.02 Orthogroups_2024-Update
Glyma.19G129100 No alias TTF-type zinc finger protein with HAT dimerisation domain 0.03 Orthogroups_2024-Update
HORVU0Hr1G004610.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g021680 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025398 DUF4371 151 359
No external refs found!