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  5. LOC_Os08g27840

LOC_Os08g27840


Description : phosphoenolpyruvate carboxylase, putative, expressed


Gene families : OG_42_0000687 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g27840
Cluster HCCA clusters: cluster_0019

Target Alias Description ECC score Gene Family Method Actions
148941 No alias phosphoenolpyruvate carboxylase 4 0.02 Orthogroups_2024-Update
GRMZM2G110714 No alias phosphoenolpyruvate carboxylase 3 0.02 Orthogroups_2024-Update
Kfl00034_0140 kfl00034_0140_v1.1 (at2g42600 : 1167.0) Encodes one of four Arabidopsis... 0.01 Orthogroups_2024-Update
LOC_Os01g02050 No alias phosphoenolpyruvate carboxylase, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s177_55V6 No alias phosphoenolpyruvate carboxylase 0.02 Orthogroups_2024-Update
Pp1s83_144V6 No alias phosphoenolpyruvate carboxylase 0.02 Orthogroups_2024-Update
Pp1s91_24V6 No alias phosphoenolpyruvate carboxylase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA InterProScan predictions
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA InterProScan predictions
BP GO:0015977 carbon fixation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR021135 PEP_COase 162 964
No external refs found!