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Description : pentatricopeptide, putative, expressed
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os08g28830 | |
| Cluster | HCCA clusters: cluster_0140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 106991 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At4g18750 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | Orthogroups_2024-Update | |
| At4g30700 | No alias | MEF29 [Source:UniProtKB/TrEMBL;Acc:A0A178UUW3] | 0.03 | Orthogroups_2024-Update | |
| Bradi1g00381 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g50980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi4g38420 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G144843 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G180600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G294900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G001700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.16G206000 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.20G163300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G015970.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G080120.11 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G047290.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G071640.4 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G113330.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G084980.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g10090 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os07g39910 | No alias | pentatricopeptide repeat domain containing protein,... | 0.03 | Orthogroups_2024-Update | |
| MA_99849g0010 | No alias | (at4g02750 : 581.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00006196-RA | No alias | (at1g11290 : 685.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00017551-RA | No alias | (at4g18750 : 421.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00018763-RA | No alias | (at1g11290 : 389.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| Potri.002G245200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.010G161800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.016G077700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s73_226V6 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
| Seita.2G203900.1 | No alias | RNA editing factor *(OTP87) | 0.02 | Orthogroups_2024-Update | |
| Seita.2G293300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.3G075900.1 | No alias | RNA editing factor *(ECD1) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G405500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.9G162400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g100800 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Solyc03g097850 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc09g059580 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Sopen04g008620 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen06g024560 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen12g032340 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006813 | potassium ion transport | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
| No external refs found! |