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  5. Solyc08g074270

Solyc08g074270


Description : Cryptochrome DASH, chloroplastic/mitochondrial (AHRD V3.3 *** CRYD_SOLLC)


Gene families : OG_42_0001991 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g074270
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_26993 No alias cryptochrome dash, chloroplasticmitochondrial 0.03 Orthogroups_2024-Update
At5g24850 No alias Cryptochrome DASH, chloroplastic/mitochondrial... 0.03 Orthogroups_2024-Update
Bradi1g31670 No alias cryptochrome 3 0.02 Orthogroups_2024-Update
Pp1s43_21V6 No alias dna photolyase protein 0.02 Orthogroups_2024-Update
Sobic.010G218200.1 No alias cryptochrome-DASH photoreceptor *(CRYD) 0.03 Orthogroups_2024-Update
Sopen08g022920 No alias FAD binding domain of DNA photolyase 0.02 Orthogroups_2024-Update
Sopen09g030000 No alias DNA photolyase 0.04 Orthogroups_2024-Update
evm.model.tig00020965.70 No alias (q651u1|cryd_orysa : 216.0) Cryptochrome DASH,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 383 555
IPR006050 DNA_photolyase_N 80 263
No external refs found!