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  5. LOC_Os08g29770

LOC_Os08g29770


Description : endoglucanase, putative, expressed


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g29770
Cluster HCCA clusters: cluster_0019

Target Alias Description ECC score Gene Family Method Actions
Bradi5g26010 No alias glycosyl hydrolase 9C1 0.02 Orthogroups_2024-Update
Brara.C02656.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Brara.G02993.1 No alias class-B endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Brara.I03254.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
GRMZM2G048165 No alias glycosyl hydrolase 9B18 0.02 Orthogroups_2024-Update
Glyma.09G231800 No alias glycosyl hydrolase 9B1 0.02 Orthogroups_2024-Update
LOC_Os08g02220 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00006676-RA No alias (at4g02290 : 363.0) glycosyl hydrolase 9B13 (GH9B13);... 0.01 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Seita.5G022400.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 41 489
No external refs found!