LOC_Os08g29854

Description : RGH1A, putative, expressed

Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os08g29854
Cluster	HCCA clusters: cluster_0091

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g01374	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
Bradi3g00741	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
Bradi4g01687	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
Bradi4g04662	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Bradi5g27069	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Glyma.U031229	No alias	HOPZ-ACTIVATED RESISTANCE 1	0.02	Orthogroups_2024-Update
LOC_Os01g16390	No alias	NB-ARC domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g16400	No alias	NB-ARC domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g40810	No alias	NBS-LRR type disease resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g04110	No alias	MLA6 protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g16530	No alias	mal, putative, expressed	0.03	Orthogroups_2024-Update
Seita.5G046800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.5G212000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.6G044800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.8G124300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G195000.1	No alias	Unknown function	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Predicted GO
BP	GO:0006887	exocytosis	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0032940	secretion by cell	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
CC	GO:0044448	cell cortex part	IEP	Predicted GO
BP	GO:0046903	secretion	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
CC	GO:0099023	tethering complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	572	631
IPR002182	NB-ARC	187	395

External Links

No external refs found!