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  5. LOC_Os08g30520

LOC_Os08g30520


Description : plant protein of unknown function domain containing protein, expressed


Gene families : OG_42_0000095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g30520
Cluster HCCA clusters: cluster_0051

Target Alias Description ECC score Gene Family Method Actions
At3g50180 No alias Transmembrane protein, putative (DUF247)... 0.02 Orthogroups_2024-Update
Bradi3g41560 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Bradi5g23930 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Brara.I00545.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.06G304300 No alias Function unknown 0.03 Orthogroups_2024-Update
PSME_00029264-RA No alias (at3g50130 : 92.4) Plant protein of unknown function... 0.03 Orthogroups_2024-Update
Potri.001G071300 No alias Plant protein of unknown function (DUF247) 0.02 Orthogroups_2024-Update
Potri.T114800 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 79 482
No external refs found!