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  5. LOC_Os08g31140

LOC_Os08g31140


Description : heavy metal-associated domain containing protein, expressed


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g31140
Cluster HCCA clusters: cluster_0094

Target Alias Description ECC score Gene Family Method Actions
A4A49_01156 No alias hypothetical protein 0.02 Orthogroups_2024-Update
A4A49_07763 No alias heavy metal-associated isoprenylated plant protein 26 0.02 Orthogroups_2024-Update
A4A49_41231 No alias heavy metal-associated isoprenylated plant protein 21 0.02 Orthogroups_2024-Update
Glyma.02G160500 No alias copper chaperone 0.02 Orthogroups_2024-Update
Glyma.06G106700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G042200 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G118340.7 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00020227-RA No alias (at5g27690 : 103.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Potri.002G005300 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G065600 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G144300 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Potri.T035900 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Sobic.003G089300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g091300 No alias Heavy metal transport/detoxification superfamily protein... 0.02 Orthogroups_2024-Update
Solyc05g055310 No alias Heavy metal transport/detoxification superfamily protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 34 75
No external refs found!