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  5. LOC_Os08g32085

LOC_Os08g32085


Description : expressed protein


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g32085
Cluster HCCA clusters: cluster_0058

Target Alias Description ECC score Gene Family Method Actions
Bradi1g73190 No alias Homeobox-leucine zipper protein family 0.03 Orthogroups_2024-Update
GRMZM2G132367 No alias homeobox protein 6 0.02 Orthogroups_2024-Update
HORVU4Hr1G075180.3 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
MA_12053g0010 No alias (at1g69780 : 145.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
MA_19453g0040 No alias (at3g01470 : 183.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
MA_799187g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00004067-RA No alias (at3g01220 : 128.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
PSME_00014389-RA No alias (at1g69780 : 146.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
PSME_00045510-RA No alias (at3g01470 : 122.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
Potri.017G081700 No alias homeobox 3 0.03 Orthogroups_2024-Update
Sobic.004G251300.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Solyc06g053220 No alias Homeobox leucine zipper protein (AHRD V3.3 *** B8YIB0_MIRJA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 141 183
IPR001356 Homeobox_dom 86 139
No external refs found!