LOC_Os08g34690

Description : transposon protein, putative, unclassified, expressed

Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os08g34690
Cluster	HCCA clusters: cluster_0080

Target	Alias	Description	ECC score	Gene Family Method
HORVU4Hr1G020180.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc12g009640	No alias	BED zinc finger,hAT family dimerization domain (AHRD...	0.02	Orthogroups_2024-Update
Sopen10g003710	No alias	Domain of unknown function (DUF4413)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR025525	hAT-like_transposase_RNase-H	316	416
IPR008906	HATC_C_dom	463	545

External Links

No external refs found!