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  5. LOC_Os08g34960

LOC_Os08g34960


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g34960
Cluster HCCA clusters: cluster_0118

Target Alias Description ECC score Gene Family Method Actions
At1g73410 No alias MYB54 [Source:UniProtKB/TrEMBL;Acc:A0A178WGB1] 0.04 Orthogroups_2024-Update
At5g11050 No alias Transcription factor MYB64... 0.02 Orthogroups_2024-Update
Brara.B03351.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Brara.G02889.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Glyma.01G049600 No alias myb domain protein 105 0.04 Orthogroups_2024-Update
Glyma.17G237900 No alias myb domain protein r1 0.03 Orthogroups_2024-Update
HORVU7Hr1G025720.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
PSME_00010642-RA No alias (at1g26780 : 220.0) Encodes LOF1 (LATERAL ORGAN... 0.03 Orthogroups_2024-Update
Potri.005G118500 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Potri.006G241700 No alias myb domain protein 3r-4 0.02 Orthogroups_2024-Update
Sobic.007G146500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.contig_4410.19 No alias (at5g02320 : 122.0) Encodes a putative c-MYB-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 60
IPR001005 SANT/Myb 68 110
No external refs found!