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  5. LOC_Os08g35240

LOC_Os08g35240


Description : AP2 domain containing protein, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g35240
Cluster HCCA clusters: cluster_0039

Target Alias Description ECC score Gene Family Method Actions
A4A49_04007 No alias ethylene-responsive transcription factor abr1 0.03 Orthogroups_2024-Update
A4A49_18156 No alias ethylene-responsive transcription factor shine 3 0.02 Orthogroups_2024-Update
A4A49_20188 No alias ethylene-responsive transcription factor erf062 0.03 Orthogroups_2024-Update
A4A49_33000 No alias ethylene-responsive transcription factor 14 0.03 Orthogroups_2024-Update
At1g19210 No alias Ethylene-responsive transcription factor ERF017... 0.02 Orthogroups_2024-Update
At1g44830 No alias Ethylene-responsive transcription factor ERF014... 0.02 Orthogroups_2024-Update
At1g68550 No alias Ethylene-responsive transcription factor ERF118... 0.02 Orthogroups_2024-Update
Brara.G02224.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Brara.G03053.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.03 Orthogroups_2024-Update
Brara.I05089.1 No alias subgroup ERF-VIII transcription factor 0.01 Orthogroups_2024-Update
Brara.K00056.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
GRMZM2G039112 No alias related to AP2 11 0.02 Orthogroups_2024-Update
GRMZM2G053503 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G111700 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.03G112100 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.05G092800 No alias cooperatively regulated by ethylene and jasmonate 1 0.03 Orthogroups_2024-Update
Glyma.05G157400 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G236500 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Glyma.20G195900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G018240.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU0Hr1G030500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G062940.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
MA_10430850g0010 No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_67841g0010 No alias (at2g44940 : 151.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_97319g0010 No alias (at3g16280 : 127.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00007051-RA No alias (at1g74930 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.01 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051697-RA No alias (q40476|erf1_tobac : 102.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
PSME_00053842-RA No alias (at5g21960 : 117.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G154200 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
Potri.001G315300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G162500 No alias related to AP2 6l 0.02 Orthogroups_2024-Update
Potri.005G233300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.011G056900 No alias ERF domain protein 12 0.03 Orthogroups_2024-Update
Potri.012G134100 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
Potri.013G056700 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Potri.015G023200 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Potri.018G085700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s14_196V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.01 Orthogroups_2024-Update
Pp1s296_32V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s67_144V6 No alias ap2 domain transcription factor 0.02 Orthogroups_2024-Update
Pp1s6_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G270800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G138200.1 No alias subgroup ERF-IX transcription factor 0.01 Orthogroups_2024-Update
Seita.2G188000.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Seita.2G364700.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
Seita.4G180800.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.5G406200.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.02 Orthogroups_2024-Update
Seita.7G098100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G237900.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.002G260800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Solyc05g051200 No alias ethylene-responsive factor 1 0.02 Orthogroups_2024-Update
Solyc09g066360 No alias Ethylene Response Factor C.3 0.04 Orthogroups_2024-Update
Solyc11g012980 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen01g027380 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 26 75
No external refs found!