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  5. LOC_Os08g36110

LOC_Os08g36110


Description : ZOS8-06 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g36110
Cluster HCCA clusters: cluster_0113

Target Alias Description ECC score Gene Family Method Actions
At3g58070 No alias GIS [Source:UniProtKB/TrEMBL;Acc:A0A178V7D1] 0.03 Orthogroups_2024-Update
Brara.B00216.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.B02398.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.C01188.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.K01136.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G082686 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Glyma.12G059500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G083170.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
MA_57501g0010 No alias (at5g25160 : 119.0) Encodes a zinc finger protein... 0.03 Orthogroups_2024-Update
Potri.009G037100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G101300 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G021400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G169700.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G361600.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G173300.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Solyc05g009380 No alias lyrate 0.03 Orthogroups_2024-Update
Sopen01g026560 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!