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  5. LOC_Os08g37350

LOC_Os08g37350


Description : ubiquitin carboxyl-terminal hydrolase family protein, expressed


Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g37350
Cluster HCCA clusters: cluster_0132

Target Alias Description ECC score Gene Family Method Actions
At1g17110 No alias Ubiquitin-specific protease 15... 0.03 Orthogroups_2024-Update
Brara.I04463.1 No alias deubiquitinase *(UBP15-21) 0.03 Orthogroups_2024-Update
GRMZM2G388987 No alias ubiquitin-specific protease 19 0.02 Orthogroups_2024-Update
Glyma.02G203500 No alias ubiquitin-specific protease 23 0.03 Orthogroups_2024-Update
Glyma.08G175500 No alias ubiquitin-specific protease 25 0.02 Orthogroups_2024-Update
Glyma.15G251100 No alias ubiquitin-specific protease 25 0.02 Orthogroups_2024-Update
LOC_Os06g08530 No alias ubiquitin carboxyl-terminal hydrolase domain containing... 0.04 Orthogroups_2024-Update
Mp1g03220.1 No alias Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Potri.011G095200 No alias ubiquitin-specific protease 15 0.03 Orthogroups_2024-Update
Pp1s136_13V6 No alias F28M20.140; ubiquitin carboxyl-terminal hydrolase family... 0.03 Orthogroups_2024-Update
evm.model.tig00000403.102 No alias (at5g10790 : 120.0) Encodes a ubiquitin-specific... 0.02 Orthogroups_2024-Update
evm.model.tig00000808.46 No alias (at2g14120 : 241.0) Encodes a dynamin related protein.... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA InterProScan predictions
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 450 753
IPR002893 Znf_MYND 123 160
No external refs found!