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  5. Solyc08g075050

Solyc08g075050


Description : Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g075050
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
PSME_00029072-RA No alias (at4g19420 : 426.0) Pectinacetylesterase family protein;... 0.02 Orthogroups_2024-Update
PSME_00030323-RA No alias (at4g19420 : 437.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
Potri.005G001500 No alias Pectinacetylesterase family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 90 421
No external refs found!