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  5. LOC_Os08g37610

LOC_Os08g37610


Description : expressed protein


Gene families : OG_42_0003153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g37610
Cluster HCCA clusters: cluster_0069

Target Alias Description ECC score Gene Family Method Actions
Bradi3g38560 No alias LETM1-like protein 0.04 Orthogroups_2024-Update
Glyma.02G200700 No alias LETM1-like protein 0.04 Orthogroups_2024-Update
Glyma.10G075900 No alias LETM1-like protein 0.02 Orthogroups_2024-Update
Kfl00432_0060 kfl00432_0060_v1.1 (at3g11560 : 83.2) LETM1-like protein; LOCATED IN:... 0.02 Orthogroups_2024-Update
MA_10431582g0010 No alias (at5g06220 : 145.0) LETM1-like protein; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Seita.6G187300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.tig00000615.41 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR011685 LETM1 781 873
No external refs found!