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  5. LOC_Os08g38060

LOC_Os08g38060


Description : RING finger protein, putative, expressed


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g38060
Cluster HCCA clusters: cluster_0017

Target Alias Description ECC score Gene Family Method Actions
Brara.A02841.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C02094.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.08G158300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G072800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G105900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G002870.3 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10435153g0010 No alias (at3g19950 : 192.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00032072-RA No alias (at3g56580 : 108.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Sobic.002G176300.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen08g021220 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019008 molybdopterin synthase complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0030289 protein phosphatase 4 complex IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 208 250
No external refs found!