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  5. LOC_Os08g38210

LOC_Os08g38210


Description : transcription factor BIM2, putative, expressed


Gene families : OG_42_0001713 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g38210
Cluster HCCA clusters: cluster_0085

Target Alias Description ECC score Gene Family Method Actions
Brara.G02844.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.17G082100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Mp4g12420.1 No alias transcription factor (bHLH) 0.03 Orthogroups_2024-Update
Pp1s90_29V6 No alias transcription factor 0.02 Orthogroups_2024-Update
Solyc06g069370 No alias bHLH transcription factor 046 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 223 272
No external refs found!