LOC_Os08g38990

Description : WRKY30, expressed

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os08g38990
Cluster	HCCA clusters: cluster_0083

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33088	No alias	putative wrky transcription factor 72	0.02	Orthogroups_2024-Update
At1g68150	No alias	WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]	0.02	Orthogroups_2024-Update
At3g58710	No alias	WRKY69 [Source:UniProtKB/TrEMBL;Acc:A0A178V7K8]	0.02	Orthogroups_2024-Update
At4g22070	No alias	Probable WRKY transcription factor 31...	0.02	Orthogroups_2024-Update
At5g46350	No alias	Probable WRKY transcription factor 8...	0.02	Orthogroups_2024-Update
Bradi1g30870	No alias	WRKY DNA-binding protein 18	0.02	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi4g30372	No alias	WRKY DNA-binding protein 18	0.02	Orthogroups_2024-Update
Bradi4g44342	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Brara.E00458.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.E00682.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F02353.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G03696.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I00520.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00205.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.K00459.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G052671	No alias	WRKY DNA-binding protein 2	0.03	Orthogroups_2024-Update
GRMZM2G304573	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
Glyma.01G043300	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.02G007500	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.02G232600	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.05G029000	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.07G023300	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
Glyma.07G057400	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.08G320200	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.09G005700	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.09G034300	No alias	WRKY DNA-binding protein 23	0.02	Orthogroups_2024-Update
Glyma.09G280200	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.14G200200	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.18G056600	No alias	WRKY DNA-binding protein 33	0.01	Orthogroups_2024-Update
LOC_Os01g61080	No alias	WRKY24, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g48260	No alias	WRKY47, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g29660	No alias	WRKY69, expressed	0.02	Orthogroups_2024-Update
MA_103616g0010	No alias	(at4g22070 : 256.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_126273g0010	No alias	(at1g69310 : 166.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_179641g0010	No alias	(at1g29860 : 118.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00010717-RA	No alias	(at4g22070 : 177.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00025597-RA	No alias	(at1g29280 : 167.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00033470-RA	No alias	(at4g18170 : 153.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00035861-RA	No alias	(at3g01970 : 109.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00048777-RA	No alias	(at4g23810 : 118.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00049059-RA	No alias	(at1g29860 : 114.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.001G044500	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
Potri.001G460600	No alias	WRKY DNA-binding protein 14	0.03	Orthogroups_2024-Update
Potri.002G186600	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.003G138600	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.004G007500	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.006G109100	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.02	Orthogroups_2024-Update
Pp1s115_10V6	No alias	wrky transcription	0.01	Orthogroups_2024-Update
Pp1s244_77V6	No alias	transcription factor WRKY21	0.02	Orthogroups_2024-Update
Pp1s35_401V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Pp1s426_27V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Pp1s5_354V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Seita.5G132800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.6G218000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G302500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G285500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc03g095770	No alias	WRKY transcription factor 80	0.03	Orthogroups_2024-Update
Solyc03g116890	No alias	WRKY transcription factor 39	0.02	Orthogroups_2024-Update
Sopen03g035820	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen06g021620	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen07g024390	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen08g004130	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
MF	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0031167	rRNA methylation	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
BP	GO:0036265	RNA (guanine-N7)-methylation	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043414	macromolecule methylation	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0070475	rRNA base methylation	IEP	Predicted GO
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	488	545
IPR003657	WRKY_dom	277	332

External Links

No external refs found!

LOC_Os08g38990

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation