LOC_Os08g39520

Description : transposon protein, putative, unclassified

Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os08g39520
Cluster	HCCA clusters: cluster_0100

Target	Alias	Description	ECC score	Gene Family Method
Glyma.15G209800	No alias	BED zinc finger ;hAT family dimerisation domain	0.03	Orthogroups_2024-Update
LOC_Os01g27030	No alias	hypothetical protein	0.02	Orthogroups_2024-Update
LOC_Os06g24530	No alias	transposon protein, putative, unclassified, expressed	0.04	Orthogroups_2024-Update
Sopen03g023750	No alias	hAT family C-terminal dimerisation region	0.03	Orthogroups_2024-Update
Sopen09g006980	No alias	hAT family C-terminal dimerisation region	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Predicted GO
BP	GO:0006605	protein targeting	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR025525	hAT-like_transposase_RNase-H	309	381
IPR008906	HATC_C_dom	390	469

External Links

No external refs found!