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  5. LOC_Os08g39590

LOC_Os08g39590


Description : inactive receptor kinase At2g26730 precursor, putative, expressed


Gene families : OG_42_0008280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g39590
Cluster HCCA clusters: cluster_0097

Target Alias Description ECC score Gene Family Method Actions
At2g42290 No alias Leucine-rich repeat protein kinase family protein... 0.02 Orthogroups_2024-Update
Brara.I03997.1 No alias LRR-III protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 98 157
IPR013210 LRR_N_plant-typ 28 67
IPR000719 Prot_kinase_dom 360 591
No external refs found!