- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
-
None - Help
Jump to ...
- Home
- Species
- Oryza sativa
- Sequence
- LOC_Os08g39980
LOC_Os08g39980
Description : DNA-binding bromodomain-containing protein, putative, expressed
Gene families : OG_42_0001513 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001513_tree
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type Description Actions Neighborhood Oryza release: LOC_Os08g39980 Cluster HCCA clusters: cluster_0041
Expression Context Conservation (ECC)
Target Alias Description ECC score Gene Family Method Actions A4A49_26825 No alias hypothetical protein 0.07 Orthogroups_2024-Update A4A49_42057 No alias hypothetical protein 0.05 Orthogroups_2024-Update Glyma.15G269600 No alias DNA-binding bromodomain-containing protein 0.03 Orthogroups_2024-Update HORVU5Hr1G073580.3 No alias Unknown function 0.02 Orthogroups_2024-Update Seita.2G254700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Functional Annotation
Type GO Term Name Evidence Source MF GO:0003674 molecular_function None Extended MF GO:0005488 binding None Extended MF GO:0005515 protein binding IEA InterProScan predictions Type GO Term Name Evidence Source BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO MF GO:0004470 malic enzyme activity IEP Predicted GO MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO MF GO:0005215 transporter activity IEP Predicted GO CC GO:0005575 cellular_component IEP Predicted GO BP GO:0006020 inositol metabolic process IEP Predicted GO BP GO:0006021 inositol biosynthetic process IEP Predicted GO BP GO:0006066 alcohol metabolic process IEP Predicted GO BP GO:0006534 cysteine metabolic process IEP Predicted GO BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO BP GO:0006563 L-serine metabolic process IEP Predicted GO BP GO:0006720 isoprenoid metabolic process IEP Predicted GO BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO BP GO:0006790 sulfur compound metabolic process IEP Predicted GO BP GO:0006793 phosphorus metabolic process IEP Predicted GO BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO BP GO:0006810 transport IEP Predicted GO BP GO:0007165 signal transduction IEP Predicted GO MF GO:0008252 nucleotidase activity IEP Predicted GO MF GO:0008253 5'-nucleotidase activity IEP Predicted GO BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO MF GO:0008374 O-acyltransferase activity IEP Predicted GO BP GO:0008610 lipid biosynthetic process IEP Predicted GO MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO BP GO:0009116 nucleoside metabolic process IEP Predicted GO BP GO:0009117 nucleotide metabolic process IEP Predicted GO BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO MF GO:0015267 channel activity IEP Predicted GO BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO CC GO:0016021 integral component of membrane IEP Predicted GO BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO MF GO:0016407 acetyltransferase activity IEP Predicted GO MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO MF GO:0016413 O-acetyltransferase activity IEP Predicted GO MF GO:0016615 malate dehydrogenase activity IEP Predicted GO MF GO:0016872 intramolecular lyase activity IEP Predicted GO BP GO:0019344 cysteine biosynthetic process IEP Predicted GO BP GO:0019637 organophosphate metabolic process IEP Predicted GO BP GO:0019751 polyol metabolic process IEP Predicted GO MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO MF GO:0022857 transmembrane transporter activity IEP Predicted GO MF GO:0030151 molybdenum ion binding IEP Predicted GO BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO CC GO:0031224 intrinsic component of membrane IEP Predicted GO BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO BP GO:0042126 nitrate metabolic process IEP Predicted GO BP GO:0042128 nitrate assimilation IEP Predicted GO BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO BP GO:0044255 cellular lipid metabolic process IEP Predicted GO BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO BP GO:0044281 small molecule metabolic process IEP Predicted GO BP GO:0044283 small molecule biosynthetic process IEP Predicted GO CC GO:0044425 membrane part IEP Predicted GO BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO BP GO:0046165 alcohol biosynthetic process IEP Predicted GO BP GO:0046173 polyol biosynthetic process IEP Predicted GO MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO BP GO:0051179 localization IEP Predicted GO BP GO:0051234 establishment of localization IEP Predicted GO BP GO:0055085 transmembrane transport IEP Predicted GO BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO MF GO:2001070 starch binding IEP Predicted GO External LinksNo external refs found! Loading ... please wait ...