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  5. LOC_Os08g40150

LOC_Os08g40150


Description : AT hook motif domain containing protein, expressed


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g40150
Cluster HCCA clusters: cluster_0053

Target Alias Description ECC score Gene Family Method Actions
Bradi3g40180 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi4g33850 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Brara.D00112.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Brara.G01916.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Brara.H00907.1 No alias AHL clade-B transcription factor 0.02 Orthogroups_2024-Update
Potri.003G116500 No alias AT-hook motif nuclear-localized protein 1 0.02 Orthogroups_2024-Update
Pp1s223_124V6 No alias dna binding 0.02 Orthogroups_2024-Update
Seita.2G255100.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Seita.4G141100.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Solyc12g094710 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen08g003910 No alias Domain of unknown function (DUF296) 0.03 Orthogroups_2024-Update
Sopen12g031610 No alias Domain of unknown function (DUF296) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0034998 oligosaccharyltransferase I complex IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 167 282
No external refs found!