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  5. LOC_Os08g40710

LOC_Os08g40710


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g40710
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G064880.2 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G024310.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G075340.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
PSME_00020293-RA No alias (at5g23930 : 110.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
PSME_00056620-RA No alias (at1g79220 : 139.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Seita.4G094400.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Seita.4G095000.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G179800.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 294 356
No external refs found!