1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g075490

Solyc08g075490


Description : 9-cis-epoxycarotenoid dioxygenase, putative (AHRD V3.3 *** B9S1S9_RICCO)


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g075490
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_18325 No alias carotenoid 9,10(9',10')-cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
A4A49_24598 No alias 9-cis-epoxycarotenoid dioxygenase nced3, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_34874 No alias putative carotenoid cleavage dioxygenase 4, chloroplastic 0.03 Orthogroups_2024-Update
At3g14440 No alias 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic... 0.03 Orthogroups_2024-Update
At4g19170 No alias Probable carotenoid cleavage dioxygenase 4,... 0.03 Orthogroups_2024-Update
Bradi3g52680 No alias nine-cis-epoxycarotenoid dioxygenase 4 0.02 Orthogroups_2024-Update
Brara.A01020.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.06 Orthogroups_2024-Update
Brara.A03189.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.05 Orthogroups_2024-Update
Glyma.08G176300 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.03 Orthogroups_2024-Update
Glyma.12G236650 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
Glyma.15G250100 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.03 Orthogroups_2024-Update
LOC_Os12g44310 No alias carotenoid cleavage dioxygenase, putative, expressed 0.07 Orthogroups_2024-Update
MA_10425950g0010 No alias (at4g19170 : 581.0) chloroplast-targeted member of a... 0.03 Orthogroups_2024-Update
MA_10434448g0010 No alias (at3g14440 : 592.0) Encodes ... 0.03 Orthogroups_2024-Update
MA_90573g0010 No alias (at4g19170 : 622.0) chloroplast-targeted member of a... 0.07 Orthogroups_2024-Update
PSME_00056181-RA No alias (at3g14440 : 662.0) Encodes ... 0.03 Orthogroups_2024-Update
Potri.011G112400 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.03 Orthogroups_2024-Update
Seita.1G288400.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.02 Orthogroups_2024-Update
Sopen08g024140 No alias Retinal pigment epithelial membrane protein 0.11 Orthogroups_2024-Update
evm.model.tig00001071.14 No alias (at3g63520 : 102.0) Encodes a protein with... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 46 512
No external refs found!