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  5. LOC_Os08g41960

LOC_Os08g41960


Description : OsMADS37 - MADS-box family gene with MIKC* type-box, expressed


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g41960
Cluster HCCA clusters: cluster_0023

Target Alias Description ECC score Gene Family Method Actions
At4g09960 No alias K-box region and MADS-box transcription factor family... 0.02 Orthogroups_2024-Update
Bradi2g26320 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Bradi2g38695 No alias MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.H01136.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.05G050700 No alias AGAMOUS-like 19 0.02 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Glyma.08G250800 No alias AGAMOUS-like 8 0.03 Orthogroups_2024-Update
Glyma.09G283800 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.15G196300 No alias MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
Potri.008G098400 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Potri.015G098400 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
Seita.6G223600.1 No alias MADS/AGL-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.007G192900.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 17 64
No external refs found!