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  5. LOC_Os08g44170

LOC_Os08g44170


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os08g44170
Cluster HCCA clusters: cluster_0091

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G022720.2 No alias FRS/FRF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU3Hr1G022760.2 No alias FRS/FRF-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os03g56630 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Pp1s168_52V6 No alias No description available 0.02 Orthogroups_2024-Update
Sobic.004G230650.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G141340.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008234 cysteine-type peptidase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 982 1138
IPR018289 MULE_transposase_dom 143 237
No external refs found!