Solyc08g076000

Description : NBS-LRR resistance protein (AHRD V3.3 *** B6E013_SOLBU)

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc08g076000
Cluster	HCCA clusters: Cluster_171

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23434	No alias	putative disease resistance protein rga3	0.02	Orthogroups_2024-Update
A4A49_34434	No alias	putative disease resistance rpp13-like protein 1	0.02	Orthogroups_2024-Update
GRMZM2G469414	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.13G190800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	Orthogroups_2024-Update
Glyma.13G192100	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
LOC_Os07g10560	No alias	expressed protein	0.03	Orthogroups_2024-Update
Potri.017G130900	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Sobic.005G197400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc02g084450	No alias	Disease resistance protein (AHRD V3.3 *** A0A124SFK9_CYNCS)	0.02	Orthogroups_2024-Update
Sopen11g028670	No alias	hypothetical protein	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	172	436

External Links

No external refs found!