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  5. LOC_Os09g05020

LOC_Os09g05020


Description : tyrosine phosphatase family protein, putative, expressed


Gene families : OG_42_0001262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g05020
Cluster HCCA clusters: cluster_0144

Target Alias Description ECC score Gene Family Method Actions
Brara.J00318.1 No alias atypical PTP phosphatase *(PFA-DSP) 0.02 Orthogroups_2024-Update
GRMZM2G084086 No alias Phosphotyrosine protein phosphatases superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004861 Siw14-like 63 215
No external refs found!