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  5. Solyc08g076340

Solyc08g076340


Description : 40S ribosomal protein S30 (AHRD V3.3 *** W9QWZ6_9ROSA)


Gene families : OG_42_0002853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002853_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc08g076340
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
227173 No alias Ribosomal protein S30 family protein 0.04 Orthogroups_2024-Update
At2g19750 No alias 40S ribosomal protein S30... 0.04 Orthogroups_2024-Update
At4g29390 No alias 40S ribosomal protein S30... 0.04 Orthogroups_2024-Update
Bradi1g48060 No alias Ribosomal protein S30 family protein 0.02 Orthogroups_2024-Update
Brara.A00791.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.B01257.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Brara.C01230.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Brara.I04721.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Cre16.g666301 No alias Ribosomal protein S30 family protein 0.15 Orthogroups_2024-Update
GRMZM2G054012 No alias Ribosomal protein S30 family protein 0.12 Orthogroups_2024-Update
HORVU7Hr1G027760.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
LOC_Os06g07580 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_10432727g0010 No alias (at5g56670 : 97.4) Ribosomal protein S30 family protein;... 0.04 Orthogroups_2024-Update
Mp2g24290.1 No alias component RPS30 of SSU proteome 0.05 Orthogroups_2024-Update
Mp8g09080.1 No alias component RPS30 of SSU proteome 0.05 Orthogroups_2024-Update
PSME_00048165-RA No alias no hits & (original description: no original description) 0.13 Orthogroups_2024-Update
Potri.012G086600 No alias Ribosomal protein S30 family protein 0.05 Orthogroups_2024-Update
Potri.014G147200 No alias Ribosomal protein S30 family protein 0.05 Orthogroups_2024-Update
Potri.015G084700 No alias Ribosomal protein S30 family protein 0.08 Orthogroups_2024-Update
Pp1s22_155V6 No alias 40s ribosomal protein s30 0.11 Orthogroups_2024-Update
Pp1s22_171V6 No alias 40s ribosomal protein s30 0.08 Orthogroups_2024-Update
Pp1s283_53V6 No alias 40s ribosomal protein s30 0.11 Orthogroups_2024-Update
Pp1s97_259V6 No alias 40s ribosomal protein s30 0.11 Orthogroups_2024-Update
evm.model.tig00001003.33 No alias no hits & (original description: no original description) 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 59
No external refs found!