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  5. LOC_Os09g07430

LOC_Os09g07430


Description : retrotransposon, putative, centromere-specific, expressed


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g07430
Cluster HCCA clusters: cluster_0082

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G045110.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g31970 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc11g028190 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 616 724
No external refs found!