Solyc08g076590


Description : SolycHsfA1c


Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g076590
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
93081 No alias heat shock transcription factor A1D 0.03 Orthogroups_2024-Update
Brara.A02699.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F02032.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H00586.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G015900 No alias heat shock transcription factor A1D 0.03 Orthogroups_2024-Update
MA_5374g0010 No alias (at1g46264 : 191.0) Encodes SCHIZORIZA, a member of Heat... 0.04 Orthogroups_2024-Update
Potri.010G082000 No alias heat shock transcription factor A6B 0.04 Orthogroups_2024-Update
Sobic.001G243000.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Sopen03g002000 No alias HSF-type DNA-binding 0.03 Orthogroups_2024-Update
Sopen03g027860 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 26 115
No external refs found!