1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g076690

Solyc08g076690


Description : high mobility group B2 (AHRD V3.3 --* AT1G20693.3)


Gene families : OG_42_0000593 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g076690
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Pp1s119_8V6 No alias inositol phosphate kinase 0.03 Orthogroups_2024-Update
Solyc08g005130 No alias Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** K4CI05_SOLLC) 0.03 Orthogroups_2024-Update
evm.model.contig_2219.2 No alias "(at2g43980 : 80.5) ""inositol 1,3,4-trisphosphate... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!