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  5. LOC_Os09g11170

LOC_Os09g11170


Description : protein binding protein, putative, expressed


Gene families : OG_42_0000330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g11170
Cluster HCCA clusters: cluster_0045

Target Alias Description ECC score Gene Family Method Actions
A4A49_15198 No alias atp-dependent rna helicase deah12, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_40485 No alias putative e3 ubiquitin-protein ligase ari8 0.04 Orthogroups_2024-Update
At2g21420 No alias RBR-type E3 ubiquitin transferase... 0.02 Orthogroups_2024-Update
Glyma.U031125 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G121290.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g25220 No alias protein binding protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00024232-RA No alias (at3g53690 : 206.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00024233-RA No alias (at3g53690 : 205.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Seita.2G206900.1 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) 0.02 Orthogroups_2024-Update
Solyc03g115920 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G14250.1) 0.02 Orthogroups_2024-Update
evm.model.tig00001128.21 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 282 327
IPR002867 IBR_dom 210 258
No external refs found!