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  5. LOC_Os09g12420

LOC_Os09g12420


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000140 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g12420
Cluster HCCA clusters: cluster_0130

Target Alias Description ECC score Gene Family Method Actions
A4A49_17478 No alias protein accelerated cell death 6 0.02 Orthogroups_2024-Update
At4g14390 No alias Ankyrin repeat family protein... 0.02 Orthogroups_2024-Update
Seita.3G349300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 1817 1919
IPR015401 Transposase_MuDR_N 1 58
IPR018289 MULE_transposase_dom 416 522
IPR004332 Transposase_MuDR 217 281
IPR019557 AminoTfrase-like_pln_mobile 955 1336
No external refs found!