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  5. LOC_Os09g15430

LOC_Os09g15430


Description : zinc finger family protein, putative, expressed


Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g15430
Cluster HCCA clusters: cluster_0064

Target Alias Description ECC score Gene Family Method Actions
Brara.I05095.1 No alias E3 ubiquitin ligase *(RIE1) 0.03 Orthogroups_2024-Update
Cre06.g288450 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
HORVU1Hr1G025600.3 No alias E3 ubiquitin ligase *(DRR1) 0.03 Orthogroups_2024-Update
Seita.5G126400.1 No alias E3 ubiquitin ligase *(DRR1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 338 379
No external refs found!