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  5. LOC_Os09g16240

LOC_Os09g16240


Description : expressed protein


Gene families : OG_42_0000140 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g16240
Cluster HCCA clusters: cluster_0057

Target Alias Description ECC score Gene Family Method Actions
Bradi5g03246 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Brara.J00202.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g16050 No alias ankyrin repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g08070 No alias ankyrin repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G349100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen05g034360 No alias Domain of unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 281 345
IPR020683 Ankyrin_rpt-contain_dom 122 201
IPR026961 PGG_dom 506 614
No external refs found!