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  5. LOC_Os09g16330

LOC_Os09g16330


Description : pleiotropic drug resistance protein, putative, expressed


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g16330
Cluster HCCA clusters: cluster_0021

Target Alias Description ECC score Gene Family Method Actions
Brara.C01827.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
GRMZM2G391815 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Solyc05g053600 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 151 365
No external refs found!