LOC_Os09g16449

Description : pleiotropic drug resistance protein 4, putative, expressed

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os09g16449
Cluster	HCCA clusters: cluster_0044

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g26040	No alias	pleiotropic drug resistance 6	0.05	Orthogroups_2024-Update
Bradi2g10110	No alias	pleiotropic drug resistance 12	0.04	Orthogroups_2024-Update
Bradi2g43150	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
HORVU3Hr1G071470.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
HORVU5Hr1G106850.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
HORVU7Hr1G037750.28	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
LOC_Os12g32820	No alias	pleiotropic drug resistance protein 3, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00000869-RA	No alias	(q5z9s8\|pdr12_orysa : 1879.0) Pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00037776-RA	No alias	(at1g59870 : 665.0) ATP binding cassette transporter....	0.02	Orthogroups_2024-Update
Seita.2G152000.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.4G181500.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.5G221600.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.004G087700.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.004G087800.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	335	415
IPR003439	ABC_transporter-like	38	190

External Links

No external refs found!