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  5. LOC_Os09g16458

LOC_Os09g16458


Description : pleiotropic drug resistance protein 4, putative, expressed


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g16458
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
426328 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
A4A49_38659 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
At4g15230 No alias ABC transporter G family member 30... 0.03 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Bradi3g34890 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Brara.G02000.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.H02545.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.02G159900 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.19G169200 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
HORVU3Hr1G071470.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
HORVU5Hr1G106850.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
LOC_Os01g24010 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00001761-RA No alias (q5z9s8|pdr12_orysa : 1822.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
Potri.001G048900 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Seita.5G221300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.9G187700.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc06g065670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen05g015600 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen05g032120 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen12g009950 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 151 331
IPR029481 ABC_trans_N 77 125
No external refs found!