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  5. LOC_Os09g17860

LOC_Os09g17860


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g17860
Cluster HCCA clusters: cluster_0080

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G047540.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G061210.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G075450.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G049230.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
CC GO:0035658 Mon1-Ccz1 complex IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 38 75
No external refs found!