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  5. LOC_Os09g17930

LOC_Os09g17930


Description : transposon protein, putative, CACTA, En/Spm sub-class, expressed


Gene families : OG_42_0006634 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g17930
Cluster HCCA clusters: cluster_0020

Target Alias Description ECC score Gene Family Method Actions
Bradi2g25160 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G063930.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 231 320
No external refs found!